STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3443Putative transcriptional regulator LYSR-type; Similar to YFIE_ECOLI gi|1788931 percent identity 96 in 308 aa (Conserved in E.coli K-12). (308 aa)    
Predicted Functional Partners:
ECs3998
Transcriptional activator of tdc operon; Similar to TDCA_ECOLI gi|1789506 percent identity 100 in 312 aa (Conserved in E.coli K-12).
  
     0.738
ECs0365
Hypothetical protein; Similar to N-terminal part (1-188 in 310 aa) of YAHB_ECOLI gi|1786508 percent identity 98 in 188 aa.
  
     0.737
ECs3032
Probable regulatory protein,similar to regulatory proteins e.g. galactose binding protein regulator [Azospirillum brasilense] gi|1730232|sp|P52661|GBPR_AZOBR percent identity 32 in 281 aa.
  
     0.723
ECs3173
Transcriptional regulator LYSR-type; Similar to LRHA_ECOLI gi|1788626 percent identity 99 in 312 aa (Conserved in E.coli K-12).
  
   
 0.696
ECs2368
Putative transcriptional regulator LYSR-type; Similar to YDHB_ECOLI gi|1787949 percent identity 100 in 310 aa (Conserved in E.coli K-12).
  
   
 0.686
ECs3444
Hypothetical protein; Similar to YFIK_ECOLI gi|1788932 percent identity 96 in 195 aa (Conserved in E.coli K-12).
 
     0.657
ECs2508
Putative transcriptional regulator LYSR-type; Similar to YEAT_ECOLI gi|1788100 percent identity 99 in 314 aa (Conserved in E.coli K-12).
  
     0.633
ECs3961
Hypothetical protein; Similar to YGJJ_ECOLI gi|1789461 percent identity 99 in 356 aa (Conserved in E.coli K-12).
      
 0.629
ECs3943
Putative transcriptional regulator LYSR-type; Similar to YGIP_ECOLI gi|1789440 percent identity 99 in 310 aa (Conserved in E.coli K-12).
  
     0.552
ECs4758
Regulator for metE and metH; Similar to METR_ECOLI gi|1790262 percent identity 100 in 317 aa (Conserved in E.coli K-12).
  
     0.427
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.