STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3509Hypothetical protein. (132 aa)    
Predicted Functional Partners:
ECs3510
Hypothetical protein; unknown,C-terminal part is similar to ctp synthase - Rickettsia prowasekii gi|7438005|pir||C71695 percent identity 24 in 138 aa, N-terminal part is similar to hypothetical protein - Plasmodium falciparum gi|4493974|emb|CAB39033.1| percent identity 24.
       0.792
ECs3511
Hypothetical protein.
       0.792
ECs3512
Probable integrase,similar to site specific recombinases e.g. integrase-recombinase protein [Methanobacterium thermoautotrophicum] gi|7428936|pir||D69219 percent identity 27 in 174 aa.
       0.778
ECs3508
Hypothetical protein.
       0.531
ECs3513
Unknown (DNA binding protein),similar to putative DNA-binding protein [Bacteriophage P4] gi|140147|sp|P12552|Y9K_BPP4 percent identity 42 in 50 aa,also similar to hypothetical protein e.g. [Yersinia pestis] gi|7467337|pir||T17447 percent identity 46.
       0.400
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.