STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3698Low-affinity L-arabinose transport system proton symport protein; Similar to ARAE_ECOLI gi|1789207 percent identity 100 in 472 aa (Conserved in E.coli K-12). (472 aa)    
Predicted Functional Partners:
ECs0067
L-ribulokinase; Similar to ARAB_ECOLI gi|1786249 percent identity 99 in 566 aa (Conserved in E.coli K-12).
   
  
 0.877
ECs0066
L-arabinose isomerase; Similar to ARAA_ECOLI gi|1786248 percent identity 99 in 500 aa (Conserved in E.coli K-12).
   
  
 0.848
ECs0065
L-ribulose-5-phosphate 4-epimerase; Similar to ARAD_ECOLI gi|1786247 percent identity 99 in 231 aa, similar to SGBE_ECOLI gi|1790008 percent identity 75 in 231 aa (Conserved in E.coli K-12).
   
  
 0.804
ECs0068
Transcriptional regulator for ara operon; Similar to ARAC_ECOLI gi|1786251 percent identity 100 in 292 aa (Conserved in E.coli K-12).
  
  
 0.776
ECs3697
Putative resistance proteins; Similar to YGEA_ECOLI gi|1789205 percent identity 99 in 230 aa (Conserved in E.coli K-12).
  
  
 0.721
ECs4448
D-xylose isomerase; Similar to XYLA_ECOLI gi|1789988 percent identity 99 in 440 aa (Conserved in E.coli K-12).
 
   
 0.684
ECs0446
Putative transport protein AraJ; Similar to ARAJ_ECOLI gi|1786595 percent identity 99 in 394 aa (Conserved in E.coli K-12).
   
  
 0.655
ECs2609
L-arabinose-binding periplasmic protein; Similar to ARAF_ECOLI gi|1788211 percent identity 99 in 329 aa (Conserved in E.coli K-12).
   
  
 0.635
ECs4447
Xylulokinase; Similar to XYLB_ECOLI gi|1789987 percent identity 99 in 484 aa (Conserved in E.coli K-12).
     
 0.627
ECs0396
Galactoside permease; Similar to LACY_ECOLI gi|1786538 percent identity 99 in 417 aa (Conserved in E.coli K-12).
  
   
 0.417
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.