STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs36992-deoxy-D-gluconate 3-dehydrogenase; Similar to KDUD_ECOLI gi|1789208 percent identity 98 in 253 aa (Conserved in E.coli K-12). (253 aa)    
Predicted Functional Partners:
ECs3700
Putative 5-keto 4-deoxyuronate isomerase; Similar to KDUI_ECOLI gi|1789209 percent identity 98 in 278 aa (Conserved in E.coli K-12).
 
 
 0.999
ECs4406
Ketodeoxygluconokinase; Similar to KDGK_ECOLI gi|1789945 percent identity 99 in 382 aa (Conserved in E.coli K-12).
  
 0.955
ECs3973
Altronate hydrolase; Similar to UXAA_ECOLI gi|1789475 percent identity 99 in 495 aa (Conserved in E.coli K-12).
  
  
 0.954
ECs5281
Mannonate hydrolase; Similar to UXUA_ECOLI gi|1790778 percent identity 99 in 393 aa (Conserved in E.coli K-12).
 
 
 0.942
ECs2830
Gluconate-6-phosphate dehydrogenase; Similar to GND_ECOLI gi|1788341 percent identity 99 in 468 aa (Conserved in E.coli K-12).
  
 0.816
ECs4228
D-ribulose-5-phosphate 3-epimerase; Similar to RPE_ECOLI gi|1789788 percent identity 100 in 225 aa (Conserved in E.coli K-12).
   
 
 0.809
ECs3785
Ribosephosphate isomerase; Similar to RPIA_ECOLI gi|1789280 percent identity 100 in 219 aa (Conserved in E.coli K-12).
     
 0.802
ECs3170
NADH dehydrogenase I chain C/D; Similar to NUOC_ECOLI gi|1788622 percent identity 99 in 600 aa (Conserved in E.coli K-12).
   
 
 0.690
ECs4835
2-keto-3-deoxy-D-gluconate transport system protein; Similar to KDGT_ECOLI gi|1790343 percent identity 99 in 330 aa (Conserved in E.coli K-12).
      
 0.627
ECs3974
Uronate isomerase; Similar to UXAC_ECOLI gi|2367192 percent identity 99 in 470 aa (Conserved in E.coli K-12).
 
   
 0.554
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.