STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3774Glycine decarboxylase; Similar to GCVP_ECOLI gi|1789269 percent identity 99 in 957 aa (Conserved in E.coli K-12). (957 aa)    
Predicted Functional Partners:
ECs1288
Putative aminomethyltransferase; Probable aminomethyl transferase,similar to aminpometyl transferases e.g. gi|7450600|pir||C75088 percent identity 26 in 333 aa.
 0.999
ECs3775
Glycine cleavage system H protein; Similar to GCVH_ECOLI gi|1789271 percent identity 100 in 129 aa (Conserved in E.coli K-12).
 
 0.999
ECs3776
Aminomethyltransferase; Similar to GCVT_ECOLI gi|1789272 percent identity 99 in 364 aa (Conserved in E.coli K-12).
 0.999
ECs0120
Lipoamide dehydrogenase LpdA; Similar to LPDA_ECOLI gi|1786307 percent identity 100 in 474 aa (Conserved in E.coli K-12).
 
 
 0.996
ECs3417
Serine hydroxymethyltransferase; Similar to GLYA_ECOLI gi|1788902 percent identity 99 in 417 aa (Conserved in E.coli K-12).
  
 
 0.996
ECs4091
Glutamate synthase large subunit; Similar to GLTB_ECOLI gi|1789605 percent identity 99 in 1517 aa (Conserved in E.coli K-12).
   
 0.988
ECs0956
Putative arylsulfatase; Similar to YBJU_ECOLI gi|1787095 percent identity 98 in 333 aa (Conserved in E.coli K-12).
    
 0.964
ECs4928
Phosphoribosylglycinamide synthetase; Similar to PURD_ECOLI gi|1790438 percent identity 97 in 429 aa (Conserved in E.coli K-12).
  
  
 0.952
ECs4495
2-amino-3-ketobutyrate CoA ligase; Similar to KBL_ECOLI gi|1790046 percent identity 100 in 398 aa (Conserved in E.coli K-12).
  
 
 0.936
ECs3423
Phosphoribosylformyl-glycineamide synthetase; Similar to PURL_ECOLI gi|1788909 percent identity 99 in 1295 aa (Conserved in E.coli K-12).
  
  
 0.921
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.