STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3820Hypothetical protein; Similar to SPRT_ECOLI gi|1789313 percent identity 98 in 165 aa (Conserved in E.coli K-12). (165 aa)    
Predicted Functional Partners:
ECs1852
Hypothetical protein; Similar to YCIS_ECOLI gi|1787535 percent identity 97 in 102 aa (Conserved in E.coli K-12).
  
     0.758
ECs3438
sigma-E factor regulatory protein RseA; Similar to RSEA_ECOLI gi|1788925 percent identity 97 in 212 aa (Conserved in E.coli K-12).
  
     0.643
ECs3821
DNA-specific endonuclease I; Similar to ENDA_ECOLI gi|1789314 percent identity 99 in 235 aa (Conserved in E.coli K-12).
     
 0.610
ECs4922
Hypothetical protein; Similar to YJAG_ECOLI gi|1790432 percent identity 99 in 196 aa (Conserved in E.coli K-12).
  
     0.609
ECs3819
Galactose-proton symport of transport system; Similar to GALP_ECOLI gi|1789312 percent identity 99 in 464 aa (Conserved in E.coli K-12).
       0.594
ECs5152
Hypothetical protein; Identical to YJET_ECOLI gi|1790619 (Conserved in E.coli K-12).
  
     0.559
ECs3822
Hypothetical protein; Similar to YGGJ_ECOLI gi|1789315 percent identity 99 in 252 aa (Conserved in E.coli K-12).
     
 0.538
ECs0718
Negative modulator of initiation of replication; Similar to SEQA_ECOLI gi|1786903 percent identity 99 in 181 aa (Conserved in E.coli K-12).
  
     0.517
ECs2541
ProP effector; Similar to PROQ_ECOLI gi|6174928|sp|P45577 percent identity 99 in 232 aa (Conserved in E.coli K-12).
  
     0.493
ECs4195
Hypothetical protein; Similar to YHEM_ECOLI gi|1789742 percent identity 97 in 119 aa (Conserved in E.coli K-12).
  
     0.474
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.