STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3846Unknown,similar to hypothetical proteins e.g. ORF29 [Escherichia coli plasmid pB171] gi|6009405|dbj|BAA84864.1| percent identity 39 in 204 aa. (224 aa)    
Predicted Functional Partners:
ECs3847
Unknown,similar to hypothetical proteins e.g. ORF30 [Escherichia coli plasmid pB171] gi|6009406|dbj|BAA84865.1| percent identity 80 in 115 aa.
 
     0.804
ECs3848
Unknown,similar to hypothetical proteins e.g. ORF31 [Escherichia coli plasmid pB171] gi|6009427|dbj|BAA84886.1| percent identity 63 in 468 aa.
       0.714
ECs1565
Unknown, similar to hypothetical protein [insertion sequence IS2] gi|140806|sp|P19776|YI21_ECOLI percent identity 100 in 53 aa.
 
     0.687
ECs3492
Hypothetical protein; unknown,N-terminal part (1-87 aa) is similar to parts of hypothetical proteins e.g. L0015 (50-136 in 512 aa) [Escherichia coli O157:H7 strain EDL933] gi|3414883|gb|AAC31494.1|.
  
     0.654
ECs3844
Hypothetical protein; Unknown,similar to C-terminal parts of hypothetical proteins e.g. L0015 [Escherichia coli O157:H7 strain EDL933]] gi|4808945|gb|AAD30027.1|AF119170_2 percent identity 88 in 206 aa,GTG start, probably disrupted.
 
     0.648
ECs3845
Unknown,similar to parts of hypothetical proteins e.g. L0013 [Escherichia coli O157:H7 strain EDL933] gi|3414881|gb|AAC31492.1| percent identity 100 in 44 aa,GTG start, probably disrupted.
       0.571
ECs0288
Hypothetical protein; Unknown,similar to C-terminal parts of hypothetical proteins e.g. [Escherichia coli insertion sequence IS2] gi|140808|sp|P19777|YI22_ECOLI percent identity 77 in 113 aa,may be disrupted.
  
     0.521
ECs0136
Hypothetical protein; Similar to YADD_ECOLI gi|1786324 percent identity 96 in 298 aa but differs at C-ter (Conserved in E.coli K-12).
  
     0.486
ECs5301
Hypothetical protein; N-terminal part (1-105 aa) is similar to YJIP_ECOLI gi|1790795 percent identity 98 in 103 aa, C-terminal (123-256 aa) is similar to YJIQ_ECOLI gi|1790796 percent identity 97 in 134 aa.
  
     0.483
ECs4253
Hypothetical protein; Similar to YHGA_ECOLI gi|1789816 percent identity 98 in 292 aa (Conserved in E.coli K-12).
  
     0.473
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.