STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs4215Putative transport; Similar to YHFC_ECOLI gi|1789764 percent identity 99 in 393 aa (Conserved in E.coli K-12). (393 aa)    
Predicted Functional Partners:
ECs4115
Hypothetical protein; Similar to YHCR_ECOLI gi|1789638 percent identity 97 in 90 aa (Conserved in E.coli K-12).
  
     0.756
ECs3899
Hypothetical protein; Similar to YQHH_ECOLI gi|1789390 percent identity 98 in 85 aa (Conserved in E.coli K-12).
  
     0.733
ECs4316
Putative receptor; Similar to YHHM_ECOLI gi|1789877 percent identity 97 in 119 aa (Conserved in E.coli K-12).
  
     0.729
ECs1755
Hypothetical protein; Similar to YCIC_ECOLI gi|1787508 percent identity 99 in 247 aa (Conserved in E.coli K-12).
  
     0.728
ECs2316
Inhibitor protein of replication at Ter sites Tus; Similar to TUS_ECOLI gi|1787895 percent identity 99 in 309 aa (Conserved in E.coli K-12).
  
     0.718
ECs3479
Small membrane protein A; Similar to SMPA_ECOLI gi|1788970 percent identity 100 in 50 aa (Conserved in E.coli K-12).
  
     0.712
ECs0115
Similar to AMPE_ECOLI gi|1786301 percent identity 99 in 284 aa (Conserved in E.coli K-12).
  
     0.687
ECs3978
Hypothetical protein; Similar to YQJB_ECOLI gi|1789482 percent identity 99 in 127 aa (Conserved in E.coli K-12).
  
     0.674
ECs5032
Hypothetical protein; Similar to YJBO_ECOLI gi|1790484 percent identity 98 in 150 aa (Conserved in E.coli K-12).
  
     0.673
ECs0892
Outer membrane protein X; Similar to OMPX_ECOLI gi|1787034 percent identity 100 in 171 aa (Conserved in E.coli K-12).
  
    0.664
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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