STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs4300Putative membrane protein. (248 aa)    
Predicted Functional Partners:
ECs2012
Hypothetical protein; Similar to B1410_ECOLI gi|1787678 percent identity 97 in 585 aa (Conserved in E.coli K-12).
  
     0.604
ECs0541
Unknown,similar to hypothetical proteins e.g. [Synechocystis sp. strain PCC 6803] gi|7469433|pir||S76109 percent identity 33 in 1384 aa,also similar to RTX protein [Aeromonas salmonicida] gi|6752871|gb|AAF27914.1|AF218037_1 percent identity 33 in 138.
  
     0.582
ECs0542
Unknown,similar to hypothetical proteins e.g. [Synechocystis sp. strain PCC 6803] gi|7469433|pir||S76109 percent identity 36 in 2014 aa,similar to RTX protein [Aeromonas salmonicida] gi|6752871|gb|AAF27914.1|AF218037_1 percent identity 36 in 2051 aa.
  
     0.568
ECs2013
Putative enzymes; Similar to YNBD_ECOLI gi|1787679 percent identity 95 in 430 aa (Conserved in E.coli K-12).
  
     0.561
ECs1242
Unknown,similar to hypothetical protein [Bacteriophage 933W] gi|4585449|gb|AAD25477.1|AF125520_72 percent identity 99 in 2793 aa.
  
     0.556
ECs3637
Hypothetical membrane protein; unknown,N-terminal part is similar to N-terminal parts of hypothetical proteins e.g. YgcG [Escherichia coli] gi|1723817|sp|P55140|YGCG_ECOLI percent identity 31 in 147 aa.
  
   
 0.538
ECs2010
Probable enzyme; Similar to B1408_ECOLI gi|1787676 percent identity 97 in 202 aa (Conserved in E.coli K-12).
  
     0.535
ECs3111
Putative membrane protein; N-terminal part (31-1372 in 1539 aa) is similar to putative membrane protein B2228_ECOLI gi|1788559 percent identity 98 in 1337 aa, C-terminal part (1380-1539 in 1539 aa) is similar B2227_ECOLI to gi|1788558 percent identity 98 in 160 aa.
  
     0.526
ECs2572
Hypothetical protein; Similar to YEBB_ECOLI gi|1788169 percent identity 98 in 233 aa (Conserved in E.coli K-12).
  
     0.513
ECs4301
ATP-binding component of leucine transport; Similar to LIVF_ECOLI gi|1789863 percent identity 99 in 241 aa (Conserved in E.coli K-12).
       0.506
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.