STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs4402Hypothetical protein; Similar to YHJD_ECOLI gi|1789939 percent identity 99 in 337 aa (Conserved in E.coli K-12). (337 aa)    
Predicted Functional Partners:
ECs2003
Hypothetical protein; Similar to YDBH_ECOLI gi|1787646 percent identity 98 in 879 aa (Conserved in E.coli K-12).
 
     0.686
ECs4628
Hypothetical protein; Similar to YIDQ_ECOLI gi|1790123 percent identity 99 in 135 aa (Conserved in E.coli K-12).
  
     0.658
ECs3982
Hypothetical protein; Similar to B3100_ECOLI gi|1789487 percent identity 97 in 99 aa (Conserved in E.coli K-12).
  
     0.642
ECs4401
Putative transcriptional regulator LYSR-type; Similar to YHJC_ECOLI gi|1789938 percent identity 98 in 323 aa (Conserved in E.coli K-12).
       0.635
ECs3834
Hypothetical protein; Similar to YGGN_ECOLI gi|1789328 percent identity 100 in 239 aa (Conserved in E.coli K-12).
  
     0.605
ECs0880
Hypothetical protein; Similar to YBIJ_ECOLI gi|1787021 percent identity 98 in 86 aa (Conserved in E.coli K-12).
  
     0.601
ECs1412
Putative oxidoreductase component; Similar to YCDY_ECOLI gi|1787272 percent identity 99 in 184 aa (Conserved in E.coli K-12).
  
     0.585
ECs2520
Hypothetical protein; Identical to B1811_ECOLI gi|1788113 (Conserved in E.coli K-12).
  
     0.550
ECs2549
Hypothetical protein; Similar to B1839_ECOLI gi|1788144 percent identity 98 in 113 aa (Conserved in E.coli K-12).
  
     0.545
ECs4240
Putative dehydrogenase; Similar to YRFF_ECOLI gi|1789801 percent identity 99 in 711 aa (Conserved in E.coli K-12).
  
     0.540
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.