STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs4691ATP-binding component of D-ribose high-affinity transport system; Similar to RBSA_ECOLI gi|1790190 percent identity 99 in 501 aa (Conserved in E.coli K-12). (501 aa)    
Predicted Functional Partners:
ECs4692
D-ribose high-affinity transport system permease protein; Similar to RBSC_ECOLI gi|1790191 percent identity 100 in 321 aa (Conserved in E.coli K-12).
 0.999
ECs4693
D-ribose periplasmic binding protein; Similar to RBSB_ECOLI gi|1790192 percent identity 99 in 296 aa (Conserved in E.coli K-12).
 
 0.998
ECs5072
Putative carbohydrate ABC transporter (permease),similar to carbohydrate ABC transporters (permease) e.g. ribose ABC transporter (permease) rbsC [Bacillus subtilis] gi|7446897|pir||B69690 percent identity 43 in 317 aa.
  
 0.958
ECs4690
Membrane-associated component of D-ribose high-affinity transport system; Identical to part (13-151 in 151 aa) of RBSD_ECOLI gi|1790189 percent identity 100 in 144 aa (Conserved in E.coli K-12).
 
  
 0.945
ECs5071
Probable carbohydrate binding protein,similar to carbohydrate binding proteins e.g. C-terminal part of bifunctional carbohydrate binding and transport protein [Streptomyces coelicolor A3(2)] gi|6714794|emb|CAB66286.1| percent identity 35 in 304 aa, r.
 
 0.925
ECs5073
Probable sugar ABC transporter, ATP-binding protein,similar to sugar ABC transporter, ATP-binding proteins e.g. ribose ABC transporter (ATP-binding protein) rbsA [Bacillus subtilis] gi|7404442|sp|P36947|RBSA_BACSU percent identity 45 in 489 aa.
  
  
 
0.907
ECs2121
Putative transport system permease protein; Similar to YDEY_ECOLI gi|1787793 percent identity 99 in 342 aa (Conserved in E.coli K-12).
  0.857
ECs3412
Putative transport system permease protein; Similar to YPHD_ECOLI gi|1788896 percent identity 99 in 332 aa (Conserved in E.coli K-12).
 
  0.856
ECs2122
Putative transport system permease protein; Similar to YDEZ_ECOLI gi|1787794 percent identity 99 in 330 aa (Conserved in E.coli K-12).
 
 0.851
ECs2606
High-affinity L-arabinose transport system protein; Similar to C-terminal part (107-329 in 329 aa) of ARAH_ECOLI SW|P08532 percent identity 99 in 222 aa (partial).
 
  0.850
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.