STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs4738Hypothetical protein; Similar to CYAY_ECOLI gi|1790239 percent identity 99 in 106 aa (Conserved in E.coli K-12). (106 aa)    
Predicted Functional Partners:
ECs3395
NifU-like protein; Similar to ISCU_ECOLI gi|7387937|sp|P77310 percent identity 100 in 128 aa (Conserved in E.coli K-12).
  
 
 0.993
ECs3396
Cysteine desulfurase; Similar to ISCS_ECOLI gi|1788879 percent identity 99 in 412 aa (Conserved in E.coli K-12).
  
 0.968
ECs3391
[2FE-2S] ferredoxin; Similar to FER_ECOLI gi|119999|sp|P25528 percent identity 100 in 111 aa (Conserved in E.coli K-12).
  
 
 0.959
ECs3390
Hypothetical protein; Identical to YFHJ_ECOLI gi|1788873 (Conserved in E.coli K-12).
  
  
 0.919
ECs3392
Molecular chaperone; Similar to HSCA_ECOLI gi|1788875 percent identity 100 in 616 aa (Conserved in E.coli K-12).
  
 
 
 0.869
ECs3393
Molecular chaperone; Similar to HSCB_ECOLI gi|1788876 percent identity 100 in 171 aa (Conserved in E.coli K-12).
  
 
 0.817
ECs4319
Hypothetical protein; Similar to YHHP_ECOLI gi|1789881 percent identity 100 in 81 aa (Conserved in E.coli K-12).
      
 0.689
ECs4256
Hypothetical protein; Similar to YHGI_ECOLI gi|1789819 percent identity 100 in 191 aa (Conserved in E.coli K-12).
   
 
 0.648
ECs4737
Hypothetical protein; Similar to B3808_ECOLI gi|1790240 percent identity 95 in 161 aa (Conserved in E.coli K-12).
       0.572
ECs2487
Hypothetical protein; Similar to YEAA_ECOLI gi|1788077 percent identity 100 in 137 aa (Conserved in E.coli K-12).
    
   0.529
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.