STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs4884Membrane protein; Similar to YIJP_ECOLI gi|4741821|gb|AAD28716.1|AF112861_1 percent identity 99 in 577 aa (Conserved in E.coli K-12). (577 aa)    
Predicted Functional Partners:
ECs4505
Lipopolysaccharide core biosynthesis protein RfaP; Similar to RFAP_ECOLI gi|1790060 percent identity 83 in 265 aa but with additional 3 aa at N terminus (Conserved in E.coli K-12).
  
   
 0.770
ECs3120
Similar to INAA_ECOLI gi|1788569 percent identity 98 in 216 aa (Conserved in E.coli K-12).
  
     0.727
ECs4506
Similar to RFAG_ECOLI gi|1790061 percent identity 90 in 374 aa (Conserved in E.coli K-12).
  
     0.721
ECs4591
Hypothetical protein; Unknown,identical to L0056 [Escherichia coli O157:H7 strain EDL933] gi|3414924|gb|AAC31535.1|,similar to rOrf1 [Escherichia coli strain E2348/69] gi|2865269|gb|AAC38362.1| percent identity 99 in 272 aa.
  
   
 0.711
ECs4079
Hypothetical protein; Similar to YHBN_ECOLI gi|1789592 percent identity 100 in 185 aa (Conserved in E.coli K-12).
      
 0.703
ECs4504
UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha- 1,3-D-galactosyltransferase,similar to WaaI (strain F653 R3 core type) [Escherichia coli] gi|3821829|gb|AAC69665.1 percent identity 99 in 335 aa.
  
     0.697
ECs5294
Hypothetical protein; Similar to part (14-322 in 323 aa) of YJIK_ECOLI gi|1790790 percent identity 78 in 309 aa but with different N-terminal part (1-19 aa) (Conserved in E.coli K-12).
  
   
 0.682
ECs2553
Hypothetical protein; Similar to B1843_ECOLI gi|1788148 percent identity 99 in 218 aa (Conserved in E.coli K-12).
  
     0.669
ECs4086
Hypothetical protein; Similar to YRBL_ECOLI gi|1789600 percent identity 99 in 210 aa (Conserved in E.coli K-12).
  
     0.631
ECs0626
Ferric enterobactin (enterochelin) transport; Similar to FEPE_ECOLI gi|1786802 percent identity 98 in 377 aa (Conserved in E.coli K-12).
  
     0.571
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.