STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs5028Hypothetical protein; Identical to YJBJ_ECOLI gi|1790479 (Conserved in E.coli K-12). (69 aa)    
Predicted Functional Partners:
ECs5334
Hyperosmotically inducible periplasmic protein; Similar to OSMY_ECOLI gi|1790836 percent identity 99 in 201 aa (Conserved in E.coli K-12).
 
  
 0.867
ECs3690
Hypothetical protein; Similar to B2833_ECOLI gi|1789198 percent identity 100 in 72 aa (Conserved in E.coli K-12).
   
    0.715
ECs4031
Putative periplasmic protein; Similar to YRAP_ECOLI gi|1789540 percent identity 100 in 191 aa (Conserved in E.coli K-12).
 
  
 0.670
ECs2086
Osmotically inducible protein; Similar to OSMC_ECOLI gi|1787757 percent identity 99 in 143 aa (Conserved in E.coli K-12).
 
  
 0.623
ECs3669
Hypothetical protein; Similar to B2809_ECOLI gi|1789174 percent identity 100 in 76 aa (Conserved in E.coli K-12).
   
    0.586
ECs3526
Hypothetical protein; Similar to YGAU_ECOLI gi|1789019 percent identity 99 in 149 aa (Conserved in E.coli K-12).
  
  
 0.570
ECs5109
Hypothetical protein; Similar to YJDJ_ECOLI gi|1790569 percent identity 98 in 90 aa (Conserved in E.coli K-12).
  
    0.540
ECs5027
DNA-damage-inducible protein F; Similar to DINF_ECOLI gi|1790477 percent identity 98 in 459 aa (Conserved in E.coli K-12).
       0.518
ECs3533
Hypothetical protein; Similar to YGAM_ECOLI gi|1789027 percent identity 100 in 113 aa (Conserved in E.coli K-12).
  
  
 0.509
ECs4804
Putative aldolase; Similar to YIHT_ECOLI gi|1790314 percent identity 99 in 292 aa (Conserved in E.coli K-12).
   
    0.502
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.