STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs5041ssDNA-binding protein; Similar to SSB_ECOLI gi|1790494 percent identity 100 in 178 aa (Conserved in E.coli K-12). (178 aa)    
Predicted Functional Partners:
ECs0186
DNA polymerase III alpha subunit; Similar to DNAE_ECOLI gi|1786381 percent identity 99 in 1160 aa (Conserved in E.coli K-12).
 
 
 0.999
ECs0523
DNA polymerase III tau and gamma subunits; Similar to DNAX_ECOLI gi|1786676 percent identity 99 in 643 aa (Conserved in E.coli K-12).
   
 0.999
ECs5236
DNA polymerase III chi subunit; Similar to HOLC_ECOLI gi|1790709 percent identity 99 in 147 aa (Conserved in E.coli K-12).
    
 0.999
ECs4752
ATP-dependent DNA helicase; Similar to RECQ_ECOLI gi|2367301 percent identity 99 in 611 aa (Conserved in E.coli K-12).
   
 0.913
ECs4862
Primosomal protein N; Similar to PRIA_ECOLI gi|1790370 percent identity 99 in 732 aa (Conserved in E.coli K-12).
    
 0.888
ECs1846
DNA topoisomerase type I omega protein; Similar to TOPA_ECOLI gi|1787529 percent identity 99 in 865 aa (Conserved in E.coli K-12).
  
 
 0.877
ECs3556
Similar to RECA_ECOLI gi|1789051 percent identity 100 in 353 aa (Conserved in E.coli K-12).
 
 
 
 0.848
ECs2813
Similar to SBCB_ECOLI gi|1788321 percent identity 98 in 475 aa (Conserved in E.coli K-12).
    
 
 0.820
ECs4743
DNA-dependent ATPase I and helicase II; Similar to UVRD_ECOLI gi|2367296 percent identity 99 in 720 aa (Conserved in E.coli K-12).
   
 
 0.817
ECs5034
Similar to DNAB_ECOLI gi|1790486 percent identity 99 in 471 aa (Conserved in E.coli K-12).
 
 0.808
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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