STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs5342Phosphopentomutase; Similar to DEOB_ECOLI gi|1790843 percent identity 100 in 407 aa (Conserved in E.coli K-12). (407 aa)    
Predicted Functional Partners:
ECs5340
2-deoxyribose-5-phosphate aldolase; Similar to DEOC_ECOLI gi|1790841 percent identity 99 in 259 aa (Conserved in E.coli K-12).
 
 
 0.998
ECs5341
Putative thymidine phosphorylase; Similar to part (44-440 in 440 aa) of DEOA_ECOLI gi|1790842 percent identity 99 in 397 aa (Conserved in E.coli K-12).
 
 
 0.997
ECs5343
Purine-nucleoside phosphorylase; Similar to DEOD_ECOLI gi|1790844 percent identity 100 in 239 aa (Conserved in E.coli K-12).
 
 
 0.993
ECs3785
Ribosephosphate isomerase; Similar to RPIA_ECOLI gi|1789280 percent identity 100 in 219 aa (Conserved in E.coli K-12).
  
 
 0.959
ECs1712
Phosphoribosylpyrophosphate synthetase; Similar to PRSA_ECOLI gi|1787458 percent identity 99 in 315 aa (Conserved in E.coli K-12).
     
 0.914
ECs3327
Transketolase 2 isozyme; Similar to TKTB_ECOLI gi|1788808 percent identity 99 in 667 aa, similar to TKTA_ECOLI gi|2367177 percent identity 75 in 661 aa (Conserved in E.coli K-12).
   
 
 0.909
ECs3810
Transketolase 1 isozyme; Similar to TKTA_ECOLI gi|2367177 percent identity 99 in 663 aa, similar to TKTB_ECOLI gi|1788808 percent identity 75 in 661 aa (Conserved in E.coli K-12).
   
 
 0.909
ECs3922
Hypothetical protein; Similar to YQIE_ECOLI gi|1789412 percent identity 100 in 209 aa (Conserved in E.coli K-12).
    
  0.903
ECs4239
Hypothetical protein; Similar to YRFE_ECOLI gi|1789800 percent identity 99 in 186 aa (Conserved in E.coli K-12).
    
  0.903
ECs0719
Phosphoglucomutase; Similar to PGM_ECOLI gi|1786904 percent identity 99 in 546 aa (Conserved in E.coli K-12).
    
  0.900
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.