STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW68419.1Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)    
Predicted Functional Partners:
ORW68420.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.899
ORW68421.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.784
ORW69354.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
ORW68416.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.737
ORW69376.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
ORW69990.1
Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
ORW68459.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.648
ORW69699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.624
ORW69737.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
ORW68418.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.594
Your Current Organism:
Mycolicibacter senuensis
NCBI taxonomy Id: 386913
Other names: DSM 44999, JCM 16017, KCTC 19147, M. senuensis, Mycobacterium senuense, Mycobacterium senuense Mun et al. 2008, Mycobacterium sp. 05-832, Mycolicibacter senuensis (Mun et al. 2008) Gupta et al. 2018, strain 05-832
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.