STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183GXR8Uncharacterized protein; Belongs to the DEAD box helicase family. (458 aa)    
Predicted Functional Partners:
A0A183HY46
Tr-type G domain-containing protein.
   
 0.889
OFLC_LOCUS7728
PRP1_N domain-containing protein.
    
 0.851
OFLC_LOCUS9189
TPR_REGION domain-containing protein.
    
 0.851
A0A183I1I5
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.819
OFLC_LOCUS2444
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.809
X798_00054
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.807
OFLC_LOCUS1898
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.806
A0A183I5C3
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.806
OFLC_LOCUS7994
Uncharacterized protein.
   
 
 0.801
OFLC_LOCUS18
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
   
 0.798
Your Current Organism:
Onchocerca flexuosa
NCBI taxonomy Id: 387005
Other names: O. flexuosa
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