STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFLC_LOCUS689Leucine Rich repeat-containing domain protein. (542 aa)    
Predicted Functional Partners:
OFLC_LOCUS2219
Phenylalanine--tRNA ligase.
  
 0.994
A0A183HZS3
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.994
OFLC_LOCUS4774
tRNA-synt_2d domain-containing protein.
  
 0.991
OFLC_LOCUS7105
PheRS_DBD1 domain-containing protein.
  
 0.991
A0A183HVW6
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.991
A0A183I825
Uncharacterized protein.
  
 0.991
OFLC_LOCUS1079
Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.974
X798_02045
Ribosomal protein S17P; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.970
OFLC_LOCUS910
Uncharacterized protein.
   
 0.958
A0A183I529
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.958
Your Current Organism:
Onchocerca flexuosa
NCBI taxonomy Id: 387005
Other names: O. flexuosa
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