STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183H6P1Uncharacterized protein. (115 aa)    
Predicted Functional Partners:
A0A183HZL9
SWIB domain-containing protein.
   
 0.982
OFLC_LOCUS118
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.954
A0A183HTX4
Uncharacterized protein.
    
 0.954
OFLC_LOCUS5452
SWIB domain-containing protein.
    
 0.951
A0A183HZD1
Uncharacterized protein.
    
 0.943
A0A183HZD8
HMG box domain-containing protein.
    
 0.943
OFLC_LOCUS2338
Uncharacterized protein.
    
 0.933
OFLC_LOCUS4788
PHD domain-containing protein.
    
 0.933
OFLC_LOCUS4513
Uncharacterized protein.
    
 0.930
OFLC_LOCUS7210
Uncharacterized protein.
    
 0.930
Your Current Organism:
Onchocerca flexuosa
NCBI taxonomy Id: 387005
Other names: O. flexuosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.