OFLC_LOCUS4637 protein (Onchocerca flexuosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

OFLC_LOCUS4637

Uncharacterized protein. (225 aa)

Predicted Functional Partners:

OFLC_LOCUS197

0.942

OFLC_LOCUS6200

0.936

OFLC_LOCUS574

0.934

OFLC_LOCUS5246

0.932

A0A183HZN2

0.932

OFLC_LOCUS5401

0.914

A0A183I3J6

0.914

OFLC_LOCUS6166

0.907

OFLC_LOCUS7536

0.907

OFLC_LOCUS355

0.879

Your Current Organism:

Onchocerca flexuosa

NCBI taxonomy Id: 387005
Other names: O. flexuosa

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183HZN2	A0A183I3J6	A0A183HZN2	A0A183I3J6	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Uncharacterized protein.	0.825
A0A183HZN2	OFLC_LOCUS197	A0A183HZN2	A0A183GY87	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Protein disulfide-isomerase.	0.769
A0A183HZN2	OFLC_LOCUS4637	A0A183HZN2	A0A183HAX6	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Uncharacterized protein.	0.932
A0A183HZN2	OFLC_LOCUS5246	A0A183HZN2	A0A183HCN4	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Thioredoxin domain-containing protein.	0.900
A0A183HZN2	OFLC_LOCUS5401	A0A183HZN2	A0A183HD39	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Uncharacterized protein.	0.825
A0A183HZN2	OFLC_LOCUS574	A0A183HZN2	A0A183GZB4	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	Protein disulfide-isomerase domain protein; Belongs to the protein disulfide isomerase family.	0.950
A0A183I3J6	A0A183HZN2	A0A183I3J6	A0A183HZN2	Uncharacterized protein.	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	0.825
A0A183I3J6	OFLC_LOCUS197	A0A183I3J6	A0A183GY87	Uncharacterized protein.	Protein disulfide-isomerase.	0.825
A0A183I3J6	OFLC_LOCUS355	A0A183I3J6	A0A183GYP5	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.825
A0A183I3J6	OFLC_LOCUS4637	A0A183I3J6	A0A183HAX6	Uncharacterized protein.	Uncharacterized protein.	0.914
A0A183I3J6	OFLC_LOCUS5246	A0A183I3J6	A0A183HCN4	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.825
A0A183I3J6	OFLC_LOCUS5401	A0A183I3J6	A0A183HD39	Uncharacterized protein.	Uncharacterized protein.	0.994
A0A183I3J6	OFLC_LOCUS574	A0A183I3J6	A0A183GZB4	Uncharacterized protein.	Protein disulfide-isomerase domain protein; Belongs to the protein disulfide isomerase family.	0.598
A0A183I3J6	OFLC_LOCUS6166	A0A183I3J6	A0A183HFA1	Uncharacterized protein.	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	0.825
A0A183I3J6	OFLC_LOCUS6200	A0A183I3J6	A0A183HFD8	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.825
A0A183I3J6	OFLC_LOCUS7536	A0A183I3J6	A0A183HJ74	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.825
OFLC_LOCUS197	A0A183HZN2	A0A183GY87	A0A183HZN2	Protein disulfide-isomerase.	Thioredoxin domain-containing protein; Belongs to the protein disulfide isomerase family.	0.769
OFLC_LOCUS197	A0A183I3J6	A0A183GY87	A0A183I3J6	Protein disulfide-isomerase.	Uncharacterized protein.	0.825
OFLC_LOCUS197	OFLC_LOCUS4637	A0A183GY87	A0A183HAX6	Protein disulfide-isomerase.	Uncharacterized protein.	0.942
OFLC_LOCUS197	OFLC_LOCUS5246	A0A183GY87	A0A183HCN4	Protein disulfide-isomerase.	Thioredoxin domain-containing protein.	0.769