STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183HGR8IF rod domain-containing protein; Belongs to the intermediate filament family. (394 aa)    
Predicted Functional Partners:
OFLC_LOCUS6718
Uncharacterized protein.
   
 0.928
A0A183I489
LEM domain-containing protein.
    
 0.830
OFLC_LOCUS2718
I-set domain-containing protein.
    
 0.816
A0A183I516
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.804
OFLC_LOCUS5229
Uncharacterized protein.
    
 0.778
A0A183HVQ3
Uncharacterized protein.
    
 0.757
A0A183I629
WW domain-containing protein.
    
  0.718
OFLC_LOCUS801
LEM domain-containing protein.
    
 
 0.716
OFLC_LOCUS2298
RBM39linker domain-containing protein.
    
 0.675
A0A183HVL4
RRM domain-containing protein.
    
 0.675
Your Current Organism:
Onchocerca flexuosa
NCBI taxonomy Id: 387005
Other names: O. flexuosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.