STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFLC_LOCUS9188Uncharacterized protein. (236 aa)    
Predicted Functional Partners:
A0A183I3U8
Uncharacterized protein.
   
 0.940
OFLC_LOCUS4408
Uncharacterized protein.
    
 0.906
A0A183I2D6
Uncharacterized protein.
    
 0.906
OFLC_LOCUS2768
Uncharacterized protein.
    
 0.754
A0A183I5B3
Myb_DNA-bind_7 domain-containing protein.
    
 0.754
A0A183HYG8
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.727
A0A183HZR7
PAN domain protein.
    
  0.727
OFLC_LOCUS1091
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
     
 0.717
OFLC_LOCUS1092
Uncharacterized protein.
     
 0.717
OFLC_LOCUS8036
Uncharacterized protein.
    
 0.712
Your Current Organism:
Onchocerca flexuosa
NCBI taxonomy Id: 387005
Other names: O. flexuosa
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