STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183I332Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (753 aa)    
Predicted Functional Partners:
OFLC_LOCUS1812
Uncharacterized protein.
   
 0.999
OFLC_LOCUS7566
PX domain-containing protein.
   
 0.998
A0A183I429
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.996
A0A183I4Y9
Uncharacterized protein.
   
 0.996
A0A183I3E7
PX domain-containing protein.
   
 0.994
OFLC_LOCUS4905
Uncharacterized protein.
   
 
 0.919
A0A183I6U6
Rab-GAP TBC domain-containing protein.
   
 
 0.919
OFLC_LOCUS8131
Uncharacterized protein.
    
 
 0.884
A0A183HWA9
Uncharacterized protein.
    
 0.878
A0A183I4H8
Uncharacterized protein.
    
 0.878
Your Current Organism:
Onchocerca flexuosa
NCBI taxonomy Id: 387005
Other names: O. flexuosa
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