STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIS_1255Conserved hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (227 aa)    
Predicted Functional Partners:
NIS_1256
Conserved hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    
0.827
NIS_1257
Glycerol-3-phosphate cytidyltransferase.
  
  
 0.788
NIS_1254
Conserved hypothetical protein.
  
    0.780
wecB
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
    0.776
NIS_1249
Undecaprenyl-phosphate galactose phosphotransferase.
       0.775
NIS_1251
Glycosyl transferase.
       0.775
NIS_1247
Sugar epimerase/dehydratase; Similar to glycosylation pathway protein PglF.
       0.774
NIS_1250
Oligosaccharide transferase; Similar to general glycosylation pathway protein PglB.
     
 0.774
NIS_1253
Hypothetical protein; Similar to glycosyl transferase.
     
 0.774
NIS_1248
Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
       0.773
Your Current Organism:
Nitratiruptor sp. SB1552
NCBI taxonomy Id: 387092
Other names: N. sp. SB155-2, Nitratiruptor sp. SB155-2
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