STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nfnBNAD(P)H-flavin oxidoreductase. (202 aa)    
Predicted Functional Partners:
NIS_1848
Conserved hypothetical protein.
  
    0.828
NIS_1851
GTP-binding protein TypA.
 
     0.818
NIS_1850
Hypothetical protein.
       0.773
NIS_0535
Long-chain fatty-acid-CoA ligase.
   
 
 0.669
NIS_1852
HAD-superfamily hydrolase.
       0.552
NIS_1726
Multidrug ABC transporter.
  
  
 0.525
NIS_1727
Multidrug ABC transporter, permease.
  
  
 0.525
ribB
Riboflavin biosynthesis bifunctional protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. Belongs to the DHBP synthase family.
   
 
 0.509
metH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.505
NIS_0293
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
     
 0.440
Your Current Organism:
Nitratiruptor sp. SB1552
NCBI taxonomy Id: 387092
Other names: N. sp. SB155-2, Nitratiruptor sp. SB155-2
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