Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SUN_0086 | SUN_0089 | SUN_0086 | SUN_0089 | Na+:H+ antiporter, NhaA family. | Hypothetical protein. | 0.511 |
SUN_0086 | SUN_0091 | SUN_0086 | SUN_0091 | Na+:H+ antiporter, NhaA family. | Conserved hypothetical protein. | 0.480 |
SUN_0086 | dcd | SUN_0086 | SUN_0090 | Na+:H+ antiporter, NhaA family. | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. | 0.560 |
SUN_0086 | topA | SUN_0086 | SUN_0088 | Na+:H+ antiporter, NhaA family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.809 |
SUN_0089 | SUN_0086 | SUN_0089 | SUN_0086 | Hypothetical protein. | Na+:H+ antiporter, NhaA family. | 0.511 |
SUN_0089 | SUN_0091 | SUN_0089 | SUN_0091 | Hypothetical protein. | Conserved hypothetical protein. | 0.721 |
SUN_0089 | SUN_0095 | SUN_0089 | SUN_0095 | Hypothetical protein. | Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.492 |
SUN_0089 | dcd | SUN_0089 | SUN_0090 | Hypothetical protein. | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. | 0.762 |
SUN_0089 | topA | SUN_0089 | SUN_0088 | Hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.511 |
SUN_0091 | SUN_0086 | SUN_0091 | SUN_0086 | Conserved hypothetical protein. | Na+:H+ antiporter, NhaA family. | 0.480 |
SUN_0091 | SUN_0089 | SUN_0091 | SUN_0089 | Conserved hypothetical protein. | Hypothetical protein. | 0.721 |
SUN_0091 | SUN_0095 | SUN_0091 | SUN_0095 | Conserved hypothetical protein. | Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.524 |
SUN_0091 | dcd | SUN_0091 | SUN_0090 | Conserved hypothetical protein. | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. | 0.739 |
SUN_0091 | topA | SUN_0091 | SUN_0088 | Conserved hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.484 |
SUN_0095 | SUN_0089 | SUN_0095 | SUN_0089 | Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein. | 0.492 |
SUN_0095 | SUN_0091 | SUN_0095 | SUN_0091 | Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Conserved hypothetical protein. | 0.524 |
SUN_0095 | dcd | SUN_0095 | SUN_0090 | Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. | 0.558 |
SUN_1530 | dcd | SUN_1530 | SUN_0090 | Conserved hypothetical protein. | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. | 0.536 |
dcd | SUN_0086 | SUN_0090 | SUN_0086 | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. | Na+:H+ antiporter, NhaA family. | 0.560 |
dcd | SUN_0089 | SUN_0090 | SUN_0089 | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. | Hypothetical protein. | 0.762 |
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