STRINGSTRING
SUN_0218 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0218" - Ribosomal RNA small subunit methyltransferase E in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0218Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (223 aa)    
Predicted Functional Partners:
SUN_0217
annotation not available (141 aa)
              0.845
SUN_1049
annotation not available (191 aa)
 
        0.697
SUN_2368
annotation not available (176 aa)
   
     
  0.687
SUN_0386
annotation not available (147 aa)
   
        0.682
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (68 aa)
 
        0.676
moeA
annotation not available (405 aa)
              0.676
SUN_1009
annotation not available (477 aa)
   
          0.666
SUN_0906
annotation not available (195 aa)
 
        0.662
SUN_1246
annotation not available (103 aa)
   
          0.658
SUN_1570
annotation not available (290 aa)
   
          0.651
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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