STRINGSTRING
SUN_0218 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0218" - 16S ribosomal RNA methyltransferase RsmE in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_021816S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (223 aa)    
Predicted Functional Partners:
SUN_0217
Hypothetical protein (141 aa)
              0.859
SUN_1049
Transformation system protein (191 aa)
 
        0.754
SUN_1570
Hypothetical protein (290 aa)
   
          0.746
SUN_1246
Hypothetical protein (103 aa)
   
          0.746
SUN_1009
Hypothetical protein (477 aa)
   
          0.720
SUN_1321
Hypothetical protein (344 aa)
   
          0.703
SUN_2073
Hypothetical protein (126 aa)
   
          0.692
SUN_0386
Hypothetical protein (147 aa)
   
        0.676
SUN_0419
Hypothetical protein (192 aa)
   
          0.657
moeA
Molybdopterin biosynthesis protein MoeA (405 aa)
              0.649
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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