STRINGSTRING
SUN_0458 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0458" - DNA polymerase III subunit delta' in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0458DNA polymerase III subunit delta’ (205 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (355 aa)
 
  0.997
dnaX
DNA polymerase III subunit gamma and tau (666 aa)
   
  0.997
SUN_0430
DNA polymerase III subunit delta (325 aa)
   
  0.996
dnaE
DNA polymerase III subunit alpha (1188 aa)
   
  0.995
polA
DNA polymerase I (898 aa)
   
  0.993
SUN_0457
Hypothetical protein (181 aa)
 
     
  0.962
SUN_2154
DNA polymerase III subunit epsilon (272 aa)
     
  0.951
dnaQ
DNA polymerase III subunit epsilon (206 aa)
     
  0.951
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (137 aa)
   
 
    0.909
SUN_0436
Pyruvate kinase (488 aa)
   
 
  0.908
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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