STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0570Isocitrate dehydrogenase, NADP-dependent. (727 aa)    
Predicted Functional Partners:
SUN_0578
2-oxoglutarate ferredoxin oxidoreductase, delta subunit; 2-oxoglutarate synthase component.
  
 
 0.983
SUN_0579
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit; 2-oxoglutarate synthase component.
  
 
 0.983
SUN_0581
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit; 2-oxoglutarate synthase component.
  
 
 0.983
SUN_0580
2-oxoglutarate ferredoxin oxidoreductase, beta subunit; 2-oxoglutarate synthase component.
  
 
 0.961
acnB
Aconitate hydratase 2; Belongs to the aconitase/IPM isomerase family.
  
 
 0.941
SUN_0571
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
  
 0.882
gltB
Glutamate synthase (NADPH), large chain.
     
 0.881
SUN_0572
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
  
 0.874
SUN_2371
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
  0.851
gdhA
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.814
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1
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