Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SUN_0435 | SUN_0606 | SUN_0435 | SUN_0606 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.440 |
SUN_0606 | SUN_0435 | SUN_0606 | SUN_0435 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.440 |
SUN_0606 | SUN_0608 | SUN_0606 | SUN_0608 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.413 |
SUN_0606 | hemK | SUN_0606 | SUN_0607 | Conserved hypothetical protein. | Protoporphyrinogen oxidase. | 0.548 |
SUN_0606 | plsX | SUN_0606 | SUN_2049 | Conserved hypothetical protein. | Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.403 |
SUN_0608 | SUN_0606 | SUN_0608 | SUN_0606 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.413 |
SUN_0608 | hemK | SUN_0608 | SUN_0607 | Conserved hypothetical protein. | Protoporphyrinogen oxidase. | 0.603 |
hemK | SUN_0606 | SUN_0607 | SUN_0606 | Protoporphyrinogen oxidase. | Conserved hypothetical protein. | 0.548 |
hemK | SUN_0608 | SUN_0607 | SUN_0608 | Protoporphyrinogen oxidase. | Conserved hypothetical protein. | 0.603 |
hemK | plsX | SUN_0607 | SUN_2049 | Protoporphyrinogen oxidase. | Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.661 |
plsX | SUN_0606 | SUN_2049 | SUN_0606 | Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | Conserved hypothetical protein. | 0.403 |
plsX | hemK | SUN_2049 | SUN_0607 | Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | Protoporphyrinogen oxidase. | 0.661 |