STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0930Transcriptional regulator, TetR family. (186 aa)    
Predicted Functional Partners:
SUN_0933
Pyridoxamine 5'-phosphate oxidase.
 
    0.688
SUN_0932
Hypothetical protein.
 
     0.629
SUN_0931
Conserved hypothetical protein.
       0.550
SUN_0925
Transcriptional regulator, AraC family.
  
   
 0.510
SUN_1158
Transcriptional regulator, TetR family.
  
     0.491
pth
peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.442
SUN_0937
Acetyltransferase.
     
 0.440
SUN_0955
HTH araC/xylS-type domain-containing protein; Probable gene remnant. Similar to the C-terminal region of Alkalilimnicola ehrlichei MLHE-1 HAD-superfamily subfamily IIA hydrolase (260 aa) MlgDRAFT_0103.
  
   
 0.438
SUN_0934
Hypothetical protein.
       0.433
SUN_0935
Hypothetical protein.
       0.433
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.