STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1218Conserved hypothetical protein. (130 aa)    
Predicted Functional Partners:
SUN_1631
Metallo-beta-lactamase family protein.
     
  0.900
trpA
Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
    
  0.810
trpB
Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
  0.800
trpB-2
Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
  0.800
tdeB
Threonine dehydratase.
     
  0.800
SUN_1217
Mitomycin resistance protein.
       0.776
SUN_1219
Hypothetical protein.
       0.658
SUN_1216
HNHc domain-containing protein; Probable gene remnant. Similar to the N- and C-terminal region of Desulfovibrio desulfuricans G20 ISPg7, transposase (438 aa) Dde_2849. This CDS appears to have a frameshift mutation following codon 210.
       0.533
SUN_1048
Transcriptional regulator, Sir2 family.
  
    0.502
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.