Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SUN_0464 | SUN_0623 | Conserved hypothetical protein. | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | 0.985 |
SUN_0464 | SUN_0630 | Conserved hypothetical protein. | Two-component response regulator. | 0.479 |
SUN_0464 | SUN_1395 | Conserved hypothetical protein. | Uncharacterized protein; Probable gene remnant. Similar to the C-terminal region of Thiomicrospira denitrificans ATCC 33889 ABC transporter, ATP-binding protein (237 aa) Tmden_1364. | 0.980 |
SUN_0464 | SUN_1834 | Conserved hypothetical protein. | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | 0.986 |
SUN_0464 | SUN_1857 | Conserved hypothetical protein. | Conserved hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | 0.983 |
SUN_0464 | SUN_1869 | Conserved hypothetical protein. | Two-component response regulator. | 0.400 |
SUN_0558 | SUN_0623 | enoyl-CoA hydratase/isomerase. | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | 0.917 |
SUN_0558 | SUN_1395 | enoyl-CoA hydratase/isomerase. | Uncharacterized protein; Probable gene remnant. Similar to the C-terminal region of Thiomicrospira denitrificans ATCC 33889 ABC transporter, ATP-binding protein (237 aa) Tmden_1364. | 0.915 |
SUN_0558 | SUN_1834 | enoyl-CoA hydratase/isomerase. | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | 0.915 |
SUN_0558 | SUN_1857 | enoyl-CoA hydratase/isomerase. | Conserved hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | 0.923 |
SUN_0623 | SUN_0464 | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | Conserved hypothetical protein. | 0.985 |
SUN_0623 | SUN_0558 | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | enoyl-CoA hydratase/isomerase. | 0.917 |
SUN_0623 | SUN_0630 | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | Two-component response regulator. | 0.937 |
SUN_0623 | SUN_1395 | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | Uncharacterized protein; Probable gene remnant. Similar to the C-terminal region of Thiomicrospira denitrificans ATCC 33889 ABC transporter, ATP-binding protein (237 aa) Tmden_1364. | 0.983 |
SUN_0623 | SUN_1645 | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | Hydrogenase maturation protein HoxX. | 0.934 |
SUN_0623 | SUN_1834 | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | 0.983 |
SUN_0623 | SUN_1857 | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | Conserved hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | 0.986 |
SUN_0623 | SUN_1869 | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | Two-component response regulator. | 0.924 |
SUN_0623 | SUN_2380 | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | Two-component response regulator. | 0.933 |
SUN_0623 | SUN_2459 | Hypothetical protein; Similar to two-component sensor histidine kinase/response regulator. | Two-component response regulator. | 0.939 |
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