Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SUN_0110 | SUN_0111 | SUN_0110 | SUN_0111 | Molybdenum cofactor biosynthesis protein D. | Molybdenum cofactor biosynthesis protein E. | 0.999 |
SUN_0110 | SUN_1787 | SUN_0110 | SUN_1787 | Molybdenum cofactor biosynthesis protein D. | ThiF/MoeB/HesA family protein. | 0.991 |
SUN_0110 | SUN_2349 | SUN_0110 | SUN_2349 | Molybdenum cofactor biosynthesis protein D. | Conserved hypothetical protein. | 0.905 |
SUN_0110 | thiG | SUN_0110 | SUN_0529 | Molybdenum cofactor biosynthesis protein D. | Thiamine biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.893 |
SUN_0111 | SUN_0110 | SUN_0111 | SUN_0110 | Molybdenum cofactor biosynthesis protein E. | Molybdenum cofactor biosynthesis protein D. | 0.999 |
SUN_0111 | SUN_1787 | SUN_0111 | SUN_1787 | Molybdenum cofactor biosynthesis protein E. | ThiF/MoeB/HesA family protein. | 0.912 |
SUN_1787 | SUN_0110 | SUN_1787 | SUN_0110 | ThiF/MoeB/HesA family protein. | Molybdenum cofactor biosynthesis protein D. | 0.991 |
SUN_1787 | SUN_0111 | SUN_1787 | SUN_0111 | ThiF/MoeB/HesA family protein. | Molybdenum cofactor biosynthesis protein E. | 0.912 |
SUN_1787 | SUN_1788 | SUN_1787 | SUN_1788 | ThiF/MoeB/HesA family protein. | Hydrolase, carbon-nitrogen family. | 0.817 |
SUN_1787 | SUN_2349 | SUN_1787 | SUN_2349 | ThiF/MoeB/HesA family protein. | Conserved hypothetical protein. | 0.905 |
SUN_1787 | iscS | SUN_1787 | SUN_0007 | ThiF/MoeB/HesA family protein. | Cysteine desulfurase. | 0.992 |
SUN_1787 | thiC | SUN_1787 | SUN_0526 | ThiF/MoeB/HesA family protein. | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.809 |
SUN_1787 | thiE | SUN_1787 | SUN_0530 | ThiF/MoeB/HesA family protein. | Thiamine-phosphate pyrophosphorylase. | 0.802 |
SUN_1787 | thiG | SUN_1787 | SUN_0529 | ThiF/MoeB/HesA family protein. | Thiamine biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.896 |
SUN_1787 | thiS | SUN_1787 | SUN_0528 | ThiF/MoeB/HesA family protein. | Thiamine biosynthesis protein ThiS. | 0.970 |
SUN_1787 | xseB | SUN_1787 | SUN_1789 | ThiF/MoeB/HesA family protein. | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.790 |
SUN_1788 | SUN_1787 | SUN_1788 | SUN_1787 | Hydrolase, carbon-nitrogen family. | ThiF/MoeB/HesA family protein. | 0.817 |
SUN_1788 | xseB | SUN_1788 | SUN_1789 | Hydrolase, carbon-nitrogen family. | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.803 |
SUN_2349 | SUN_0110 | SUN_2349 | SUN_0110 | Conserved hypothetical protein. | Molybdenum cofactor biosynthesis protein D. | 0.905 |
SUN_2349 | SUN_1787 | SUN_2349 | SUN_1787 | Conserved hypothetical protein. | ThiF/MoeB/HesA family protein. | 0.905 |
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