Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1908Hypothetical protein. (1860 aa)    
Predicted Functional Partners:
SUN_1910
Conserved hypothetical protein.
       0.809
SUN_1909
Conserved hypothetical protein.
       0.802
SUN_1911
Conserved hypothetical protein.
       0.795
SUN_1912
Conserved hypothetical protein.
       0.767
SUN_1351
Cell division protein FtsK.
   
 
 0.749
SUN_1589
TonB-dependent receptor.
    
   0.657
SUN_1091
Conserved hypothetical protein.
  
 
 0.611
SUN_0335
Hypothetical protein.
  
 
 0.602
SUN_1913
Sigma 54 modulation protein/ribosomal protein S30EA.
       0.532
SUN_1643
Conserved hypothetical protein.
  
     0.506
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1
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