Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SUN_0056 | SUN_1294 | SUN_0056 | SUN_1294 | Hypothetical protein. | RNA-metabolising metallo-beta-lactamase. | 0.410 |
SUN_0056 | SUN_1512 | SUN_0056 | SUN_1512 | Hypothetical protein. | Acetoin utilization protein. | 0.425 |
SUN_0056 | SUN_2110 | SUN_0056 | SUN_2110 | Hypothetical protein. | Hypothetical protein. | 0.809 |
SUN_0056 | SUN_2182 | SUN_0056 | SUN_2182 | Hypothetical protein. | RNA-metabolising metallo-beta-lactamase. | 0.410 |
SUN_0056 | SUN_2354 | SUN_0056 | SUN_2354 | Hypothetical protein. | Oxidoreductase. | 0.820 |
SUN_0056 | alaS | SUN_0056 | SUN_0346 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.896 |
SUN_0056 | rpoB | SUN_0056 | SUN_0131 | Hypothetical protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.574 |
SUN_0056 | rpoZ | SUN_0056 | SUN_1746 | Hypothetical protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.545 |
SUN_1294 | SUN_0056 | SUN_1294 | SUN_0056 | RNA-metabolising metallo-beta-lactamase. | Hypothetical protein. | 0.410 |
SUN_1294 | SUN_2110 | SUN_1294 | SUN_2110 | RNA-metabolising metallo-beta-lactamase. | Hypothetical protein. | 0.819 |
SUN_1294 | apaH | SUN_1294 | SUN_0610 | RNA-metabolising metallo-beta-lactamase. | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.784 |
SUN_1294 | gpmI | SUN_1294 | SUN_2191 | RNA-metabolising metallo-beta-lactamase. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.891 |
SUN_1294 | rpoB | SUN_1294 | SUN_0131 | RNA-metabolising metallo-beta-lactamase. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.838 |
SUN_1294 | rpoZ | SUN_1294 | SUN_1746 | RNA-metabolising metallo-beta-lactamase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.833 |
SUN_1512 | SUN_0056 | SUN_1512 | SUN_0056 | Acetoin utilization protein. | Hypothetical protein. | 0.425 |
SUN_1512 | SUN_2110 | SUN_1512 | SUN_2110 | Acetoin utilization protein. | Hypothetical protein. | 0.813 |
SUN_2110 | SUN_0056 | SUN_2110 | SUN_0056 | Hypothetical protein. | Hypothetical protein. | 0.809 |
SUN_2110 | SUN_1294 | SUN_2110 | SUN_1294 | Hypothetical protein. | RNA-metabolising metallo-beta-lactamase. | 0.819 |
SUN_2110 | SUN_1512 | SUN_2110 | SUN_1512 | Hypothetical protein. | Acetoin utilization protein. | 0.813 |
SUN_2110 | SUN_2182 | SUN_2110 | SUN_2182 | Hypothetical protein. | RNA-metabolising metallo-beta-lactamase. | 0.819 |
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