Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SUN_0746 | SUN_1074 | SUN_0746 | SUN_1074 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.604 |
SUN_0746 | SUN_2268 | SUN_0746 | SUN_2268 | Conserved hypothetical protein. | Phosphate transport system regulator. | 0.716 |
SUN_1004 | SUN_2268 | SUN_1004 | SUN_2268 | Hypothetical protein. | Phosphate transport system regulator. | 0.511 |
SUN_1065 | SUN_2268 | SUN_1065 | SUN_2268 | Conserved hypothetical protein. | Phosphate transport system regulator. | 0.566 |
SUN_1065 | pstA | SUN_1065 | SUN_2270 | Conserved hypothetical protein. | Phosphate ABC transporter, permease. | 0.794 |
SUN_1065 | pstB | SUN_1065 | SUN_2269 | Conserved hypothetical protein. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.794 |
SUN_1065 | pstC | SUN_1065 | SUN_2271 | Conserved hypothetical protein. | Phosphate ABC transporter, permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.794 |
SUN_1074 | SUN_0746 | SUN_1074 | SUN_0746 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.604 |
SUN_1074 | SUN_2268 | SUN_1074 | SUN_2268 | Conserved hypothetical protein. | Phosphate transport system regulator. | 0.501 |
SUN_2267 | SUN_2268 | SUN_2267 | SUN_2268 | Two-component response regulator. | Phosphate transport system regulator. | 0.573 |
SUN_2267 | pstA | SUN_2267 | SUN_2270 | Two-component response regulator. | Phosphate ABC transporter, permease. | 0.500 |
SUN_2267 | pstB | SUN_2267 | SUN_2269 | Two-component response regulator. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.505 |
SUN_2267 | pstC | SUN_2267 | SUN_2271 | Two-component response regulator. | Phosphate ABC transporter, permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.499 |
SUN_2268 | SUN_0746 | SUN_2268 | SUN_0746 | Phosphate transport system regulator. | Conserved hypothetical protein. | 0.716 |
SUN_2268 | SUN_1004 | SUN_2268 | SUN_1004 | Phosphate transport system regulator. | Hypothetical protein. | 0.511 |
SUN_2268 | SUN_1065 | SUN_2268 | SUN_1065 | Phosphate transport system regulator. | Conserved hypothetical protein. | 0.566 |
SUN_2268 | SUN_1074 | SUN_2268 | SUN_1074 | Phosphate transport system regulator. | Conserved hypothetical protein. | 0.501 |
SUN_2268 | SUN_2267 | SUN_2268 | SUN_2267 | Phosphate transport system regulator. | Two-component response regulator. | 0.573 |
SUN_2268 | metG | SUN_2268 | SUN_1128 | Phosphate transport system regulator. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.556 |
SUN_2268 | pstA | SUN_2268 | SUN_2270 | Phosphate transport system regulator. | Phosphate ABC transporter, permease. | 0.946 |
page 1 of 3