Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SUN_2005 | SUN_2386 | Conserved hypothetical protein. | ATPase, AAA family. | 0.642 |
SUN_2005 | SUN_2389 | Conserved hypothetical protein. | Von Willebrand factor type A domain protein. | 0.785 |
SUN_2005 | SUN_2390 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.725 |
SUN_2005 | SUN_2391 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.571 |
SUN_2005 | SUN_2392 | Conserved hypothetical protein. | Hypothetical protein. | 0.531 |
SUN_2005 | SUN_2406 | Conserved hypothetical protein. | Von Willebrand factor type A domain protein. | 0.795 |
SUN_2383 | SUN_2386 | Non-specific acid phosphatase. | ATPase, AAA family. | 0.470 |
SUN_2383 | SUN_2387 | Non-specific acid phosphatase. | Conserved hypothetical protein. | 0.695 |
SUN_2383 | SUN_2388 | Non-specific acid phosphatase. | Conserved hypothetical protein. | 0.859 |
SUN_2383 | SUN_2389 | Non-specific acid phosphatase. | Von Willebrand factor type A domain protein. | 0.629 |
SUN_2383 | SUN_2390 | Non-specific acid phosphatase. | Conserved hypothetical protein. | 0.700 |
SUN_2383 | SUN_2391 | Non-specific acid phosphatase. | Conserved hypothetical protein. | 0.808 |
SUN_2383 | SUN_2392 | Non-specific acid phosphatase. | Hypothetical protein. | 0.836 |
SUN_2386 | SUN_2005 | ATPase, AAA family. | Conserved hypothetical protein. | 0.642 |
SUN_2386 | SUN_2383 | ATPase, AAA family. | Non-specific acid phosphatase. | 0.470 |
SUN_2386 | SUN_2387 | ATPase, AAA family. | Conserved hypothetical protein. | 0.910 |
SUN_2386 | SUN_2388 | ATPase, AAA family. | Conserved hypothetical protein. | 0.811 |
SUN_2386 | SUN_2389 | ATPase, AAA family. | Von Willebrand factor type A domain protein. | 0.840 |
SUN_2386 | SUN_2390 | ATPase, AAA family. | Conserved hypothetical protein. | 0.826 |
SUN_2386 | SUN_2391 | ATPase, AAA family. | Conserved hypothetical protein. | 0.815 |
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