STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_11190Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (559 aa)    
Predicted Functional Partners:
TanjilG_01173
Epimerase domain-containing protein.
   
  
 0.483
TanjilG_30160
Epimerase domain-containing protein.
   
  
 0.483
TanjilG_20899
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.432
TanjilG_17618
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.432
TanjilG_19391
Phenylalanine ammonia-lyase.
   
  
 0.430
TanjilG_14620
Phenylalanine ammonia-lyase.
   
  
 0.430
TanjilG_11449
Phenylalanine ammonia-lyase.
   
  
 0.430
TanjilG_31219
Phenylalanine ammonia-lyase.
   
  
 0.430
TanjilG_20439
Phenylalanine ammonia-lyase.
   
  
 0.430
TanjilG_17132
Uncharacterized protein; Belongs to the PAL/histidase family.
   
  
 0.430
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.