STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_13645Uncharacterized protein. (129 aa)    
Predicted Functional Partners:
TanjilG_14239
RPOL4c domain-containing protein.
    
 0.857
TanjilG_20063
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
 0.856
TanjilG_20437
Uncharacterized protein.
    
 0.855
TanjilG_25102
Spt4 domain-containing protein.
    
 0.853
TanjilG_17830
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.841
TanjilG_04189
Pectate lyase.
    
 0.837
TanjilG_04019
Uncharacterized protein.
    
 0.795
TanjilG_04670
Uncharacterized protein.
    
 0.795
TanjilG_28149
RPOLD domain-containing protein.
    
 0.794
TanjilG_17868
RPOL4c domain-containing protein.
    
 0.794
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
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