STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_25860ERCC4 domain-containing protein. (952 aa)    
Predicted Functional Partners:
TanjilG_26974
Uncharacterized protein.
  
 0.967
TanjilG_18763
DUF1767 domain-containing protein.
    
 0.959
TanjilG_01754
ERCC4 domain-containing protein.
    
 0.938
TanjilG_21255
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.930
TanjilG_10560
MPN domain-containing protein.
   
 0.904
TanjilG_26799
MPN domain-containing protein.
   
 0.904
TanjilG_15691
Uncharacterized protein.
   
 0.902
TanjilG_15719
Toprim domain-containing protein.
    
 0.878
TanjilG_08544
zf-C4_Topoisom domain-containing protein.
    
 0.878
TanjilG_25961
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 0.878
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.