STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_16818TFIIB-type domain-containing protein. (348 aa)    
Predicted Functional Partners:
TanjilG_17830
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.981
TanjilG_14239
RPOL4c domain-containing protein.
    
 0.979
TanjilG_20063
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
 0.978
TanjilG_24409
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.976
TanjilG_20437
Uncharacterized protein.
    
 0.974
TanjilG_12087
Uncharacterized protein.
    
 0.972
TanjilG_24400
Uncharacterized protein.
   
 0.967
TanjilG_10613
Uncharacterized protein.
   
 0.967
TanjilG_28149
RPOLD domain-containing protein.
   
 0.960
TanjilG_26288
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.960
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.