TanjilG_22990 protein (Lupinus angustifolius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TanjilG_22990

Uncharacterized protein. (973 aa)

Predicted Functional Partners:

TanjilG_22218

0.988

TanjilG_11909

0.974

TanjilG_04907

0.974

TanjilG_21497

0.942

TanjilG_23643

0.905

TanjilG_26730

0.904

TanjilG_26717

0.900

TanjilG_01178

0.876

TanjilG_21255

0.857

TanjilG_06189

0.855

Your Current Organism:

Lupinus angustifolius

NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TanjilG_01178	TanjilG_04907	A0A1J7IHB0	A0A394DEX5	UmuC domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.992
TanjilG_01178	TanjilG_06189	A0A1J7IHB0	A0A1J7G336	UmuC domain-containing protein.	DNA polymerase.	0.878
TanjilG_01178	TanjilG_11909	A0A1J7IHB0	A0A1J7H4E1	UmuC domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.992
TanjilG_01178	TanjilG_21255	A0A1J7IHB0	A0A4P1RN19	UmuC domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.905
TanjilG_01178	TanjilG_21497	A0A1J7IHB0	A0A4P1QUA9	UmuC domain-containing protein.	DNA polymerase.	0.993
TanjilG_01178	TanjilG_22218	A0A1J7IHB0	A0A4P1QU59	UmuC domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.996
TanjilG_01178	TanjilG_22990	A0A1J7IHB0	A0A1J7HEA9	UmuC domain-containing protein.	Uncharacterized protein.	0.876
TanjilG_01178	TanjilG_23643	A0A1J7IHB0	A0A4P1R9R6	UmuC domain-containing protein.	DUF1744 domain-containing protein.	0.933
TanjilG_01178	TanjilG_26717	A0A1J7IHB0	A0A1J7HRB3	UmuC domain-containing protein.	DNA polymerase.	0.932
TanjilG_01178	TanjilG_26730	A0A1J7IHB0	A0A1J7IM62	UmuC domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.932
TanjilG_04907	TanjilG_01178	A0A394DEX5	A0A1J7IHB0	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	UmuC domain-containing protein.	0.992
TanjilG_04907	TanjilG_06189	A0A394DEX5	A0A1J7G336	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA polymerase.	0.985
TanjilG_04907	TanjilG_11909	A0A394DEX5	A0A1J7H4E1	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.900
TanjilG_04907	TanjilG_21255	A0A394DEX5	A0A4P1RN19	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.984
TanjilG_04907	TanjilG_21497	A0A394DEX5	A0A4P1QUA9	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA polymerase.	0.972
TanjilG_04907	TanjilG_22218	A0A394DEX5	A0A4P1QU59	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.989
TanjilG_04907	TanjilG_22990	A0A394DEX5	A0A1J7HEA9	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.974
TanjilG_04907	TanjilG_23643	A0A394DEX5	A0A4P1R9R6	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DUF1744 domain-containing protein.	0.988
TanjilG_04907	TanjilG_26717	A0A394DEX5	A0A1J7HRB3	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA polymerase.	0.986
TanjilG_04907	TanjilG_26730	A0A394DEX5	A0A1J7IM62	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.986