STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_07154Uncharacterized protein. (690 aa)    
Predicted Functional Partners:
TanjilG_28240
Uncharacterized protein.
     
 0.901
TanjilG_11797
WD_REPEATS_REGION domain-containing protein.
    
 0.670
TanjilG_02368
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.666
TanjilG_11924
Chromo domain-containing protein.
    
 0.608
TanjilG_33044
Chromo domain-containing protein.
    
 0.608
TanjilG_28992
Chromo domain-containing protein.
    
 0.608
TanjilG_31126
Ubiquitin-like domain-containing protein.
    
  0.547
TanjilG_02566
Ubiquitin-like domain-containing protein.
    
  0.547
TanjilG_24209
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
 0.540
TanjilG_16388
B30.2/SPRY domain-containing protein.
    
 0.500
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.