STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_01900RTR1-type domain-containing protein. (843 aa)    
Predicted Functional Partners:
TanjilG_14239
RPOL4c domain-containing protein.
    
 0.987
TanjilG_20437
Uncharacterized protein.
    
 0.986
TanjilG_20063
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
 0.981
TanjilG_17868
RPOL4c domain-containing protein.
    
 0.971
TanjilG_28149
RPOLD domain-containing protein.
    
 0.965
TanjilG_27973
RPOLD domain-containing protein.
    
 0.965
TanjilG_04019
Uncharacterized protein.
    
 0.958
TanjilG_04670
Uncharacterized protein.
    
 0.958
TanjilG_27224
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.946
TanjilG_27028
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.946
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
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