STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_21816Uncharacterized protein. (169 aa)    
Predicted Functional Partners:
TanjilG_20437
Uncharacterized protein.
   
 0.939
TanjilG_14239
RPOL4c domain-containing protein.
   
 0.935
TanjilG_20063
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 0.933
TanjilG_26695
RNA_pol_L_2 domain-containing protein.
  
 0.917
TanjilG_10183
Uncharacterized protein.
   
 0.910
TanjilG_25102
Spt4 domain-containing protein.
   
 0.906
TanjilG_07032
Uncharacterized protein.
   
 0.906
TanjilG_32028
Uncharacterized protein.
   
 0.894
TanjilG_07296
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
   
 0.890
TanjilG_08946
Uncharacterized protein.
   
 0.884
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
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