STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_23873GRAS domain-containing protein; Belongs to the GRAS family. (583 aa)    
Predicted Functional Partners:
TanjilG_11492
Abhydrolase_3 domain-containing protein.
    
 0.969
TanjilG_10104
Abhydrolase_3 domain-containing protein.
    
 0.969
TanjilG_21520
Abhydrolase_3 domain-containing protein.
    
 0.969
TanjilG_24632
Abhydrolase_3 domain-containing protein.
    
 0.969
TanjilG_12411
F-box domain-containing protein.
    
 0.956
TanjilG_05332
BHLH domain-containing protein.
    
 0.924
TanjilG_07490
BHLH domain-containing protein.
    
 0.924
TanjilG_15480
BHLH domain-containing protein.
    
 0.924
TanjilG_07479
Uncharacterized protein.
    
 0.918
TanjilG_31620
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
 
 0.576
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
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