TanjilG_12661 protein (Lupinus angustifolius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TanjilG_12661

Uncharacterized protein. (2310 aa)

Predicted Functional Partners:

TanjilG_04946

0.906

TanjilG_32034

0.773

TanjilG_05680

0.771

TanjilG_24588

0.761

TanjilG_13130

0.754

TanjilG_00210

0.754

TanjilG_21140

0.754

TanjilG_00182

0.754

TanjilG_20340

0.748

TanjilG_23740

0.733

Your Current Organism:

Lupinus angustifolius

NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TanjilG_00182	TanjilG_04946	A0A394D0E3	A0A394DFE9	CoA carboxyltransferase N-terminal domain-containing protein.	BPL/LPL catalytic domain-containing protein.	0.840
TanjilG_00182	TanjilG_05680	A0A394D0E3	A0A4P1QSL6	CoA carboxyltransferase N-terminal domain-containing protein.	Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	0.984
TanjilG_00182	TanjilG_12661	A0A394D0E3	A0A4P1QZ45	CoA carboxyltransferase N-terminal domain-containing protein.	Uncharacterized protein.	0.754
TanjilG_00182	TanjilG_23740	A0A394D0E3	A0A1J7GGU3	CoA carboxyltransferase N-terminal domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.582
TanjilG_00182	TanjilG_24588	A0A394D0E3	A0A4P1RL24	CoA carboxyltransferase N-terminal domain-containing protein.	Uncharacterized protein.	0.979
TanjilG_00182	TanjilG_32034	A0A394D0E3	A0A4P1RFB2	CoA carboxyltransferase N-terminal domain-containing protein.	Uncharacterized protein.	0.983
TanjilG_00210	TanjilG_04946	A0A1J7HQT8	A0A394DFE9	Uncharacterized protein.	BPL/LPL catalytic domain-containing protein.	0.840
TanjilG_00210	TanjilG_05680	A0A1J7HQT8	A0A4P1QSL6	Uncharacterized protein.	Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	0.963
TanjilG_00210	TanjilG_12661	A0A1J7HQT8	A0A4P1QZ45	Uncharacterized protein.	Uncharacterized protein.	0.754
TanjilG_00210	TanjilG_23740	A0A1J7HQT8	A0A1J7GGU3	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.582
TanjilG_00210	TanjilG_24588	A0A1J7HQT8	A0A4P1RL24	Uncharacterized protein.	Uncharacterized protein.	0.963
TanjilG_00210	TanjilG_32034	A0A1J7HQT8	A0A4P1RFB2	Uncharacterized protein.	Uncharacterized protein.	0.963
TanjilG_04946	TanjilG_00182	A0A394DFE9	A0A394D0E3	BPL/LPL catalytic domain-containing protein.	CoA carboxyltransferase N-terminal domain-containing protein.	0.840
TanjilG_04946	TanjilG_00210	A0A394DFE9	A0A1J7HQT8	BPL/LPL catalytic domain-containing protein.	Uncharacterized protein.	0.840
TanjilG_04946	TanjilG_05680	A0A394DFE9	A0A4P1QSL6	BPL/LPL catalytic domain-containing protein.	Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	0.843
TanjilG_04946	TanjilG_12661	A0A394DFE9	A0A4P1QZ45	BPL/LPL catalytic domain-containing protein.	Uncharacterized protein.	0.906
TanjilG_04946	TanjilG_13130	A0A394DFE9	A0A1J7FZ57	BPL/LPL catalytic domain-containing protein.	Uncharacterized protein.	0.840
TanjilG_04946	TanjilG_21140	A0A394DFE9	A0A1J7HR63	BPL/LPL catalytic domain-containing protein.	RuBisCO_large domain-containing protein.	0.840
TanjilG_04946	TanjilG_24588	A0A394DFE9	A0A4P1RL24	BPL/LPL catalytic domain-containing protein.	Uncharacterized protein.	0.843
TanjilG_04946	TanjilG_32034	A0A394DFE9	A0A4P1RFB2	BPL/LPL catalytic domain-containing protein.	Uncharacterized protein.	0.843