TanjilG_17109 protein (Lupinus angustifolius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TanjilG_17109

DUF2451 domain-containing protein. (172 aa)

Predicted Functional Partners:

TanjilG_06777

0.913

TanjilG_05354

0.910

TanjilG_27134

0.909

TanjilG_15441

0.909

TanjilG_31780

0.909

TanjilG_17108

0.823

TanjilG_07047

0.819

TanjilG_05414

0.818

TanjilG_14229

0.485

TanjilG_14917

0.465

Your Current Organism:

Lupinus angustifolius

NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TanjilG_05354	TanjilG_05414	A0A1J7IKF9	A0A1J7IIN2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.912
TanjilG_05354	TanjilG_06777	A0A1J7IKF9	A0A1J7G094	Uncharacterized protein.	Uncharacterized protein.	0.992
TanjilG_05354	TanjilG_07047	A0A1J7IKF9	A0A4P1QXW1	Uncharacterized protein.	Vps54 domain-containing protein.	0.962
TanjilG_05354	TanjilG_14229	A0A1J7IKF9	A0A1J7GKW7	Uncharacterized protein.	CNH domain-containing protein.	0.497
TanjilG_05354	TanjilG_17108	A0A1J7IKF9	A0A4P1R0R8	Uncharacterized protein.	Vps54_N domain-containing protein.	0.932
TanjilG_05354	TanjilG_17109	A0A1J7IKF9	A0A4P1R0M0	Uncharacterized protein.	DUF2451 domain-containing protein.	0.910
TanjilG_05354	TanjilG_27134	A0A1J7IKF9	A0A4P1QW93	Uncharacterized protein.	Vps53_N domain-containing protein.	0.987
TanjilG_05354	TanjilG_31780	A0A1J7IKF9	A0A4P1RM78	Uncharacterized protein.	Vps53_N domain-containing protein.	0.987
TanjilG_05414	TanjilG_05354	A0A1J7IIN2	A0A1J7IKF9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.912
TanjilG_05414	TanjilG_06777	A0A1J7IIN2	A0A1J7G094	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.842
TanjilG_05414	TanjilG_07047	A0A1J7IIN2	A0A4P1QXW1	WD_REPEATS_REGION domain-containing protein.	Vps54 domain-containing protein.	0.937
TanjilG_05414	TanjilG_15441	A0A1J7IIN2	A0A4P1RLE3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.912
TanjilG_05414	TanjilG_17108	A0A1J7IIN2	A0A4P1R0R8	WD_REPEATS_REGION domain-containing protein.	Vps54_N domain-containing protein.	0.818
TanjilG_05414	TanjilG_17109	A0A1J7IIN2	A0A4P1R0M0	WD_REPEATS_REGION domain-containing protein.	DUF2451 domain-containing protein.	0.818
TanjilG_05414	TanjilG_27134	A0A1J7IIN2	A0A4P1QW93	WD_REPEATS_REGION domain-containing protein.	Vps53_N domain-containing protein.	0.873
TanjilG_05414	TanjilG_31780	A0A1J7IIN2	A0A4P1RM78	WD_REPEATS_REGION domain-containing protein.	Vps53_N domain-containing protein.	0.873
TanjilG_06777	TanjilG_05354	A0A1J7G094	A0A1J7IKF9	Uncharacterized protein.	Uncharacterized protein.	0.992
TanjilG_06777	TanjilG_05414	A0A1J7G094	A0A1J7IIN2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.842
TanjilG_06777	TanjilG_07047	A0A1J7G094	A0A4P1QXW1	Uncharacterized protein.	Vps54 domain-containing protein.	0.996
TanjilG_06777	TanjilG_14229	A0A1J7G094	A0A1J7GKW7	Uncharacterized protein.	CNH domain-containing protein.	0.443